• misc
    • fixed CRAN notes (removed itemize from documentation)
    • rewrote NEWS file (new format)
    • rewrote CITATION file (new format)
  • bug fixes
    • removed S3 class exportation
  • bug fixes
    • fixed a bug related to a change in stringsAsFactor policy
  • misc
    • updated authors’ names and emails
  • remove Biocstyle for vignette formatting (instable links with Bioconductor)
  • updated references with published article
  • new features
    • GLMnetToGraph can now be used with matrices
  • improved
    • column names of the count data are now included in the result of GLMnetwork
  • bug fixes
    • fixed two bugs in plot.HDpath
  • documentation
    • added a vignette and a complete user guide
    • fixed a few typos
    • fixed an imprecise statement in print.GLMpath documentation
    • updated references
    • improved README file
  • Initial release